miRNA display CGI


Results 1 - 20 of 68 are showing below:
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GenBank Identifier RefSeq Acc. Name
66392052 NC_007024.1 Xanthomonas campestris pv. pelargonii phage Xp15

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32324 + 37320 89 25.5 -31.7 5' arm      3' arm
32341 - 12026 90 25 -24.1 YP_239284 5' arm      3' arm
32323 + 34974 89 24.5 -34.7 5' arm      3' arm
32340 - 9752 89 24 -19.7 YP_239279 5' arm      3' arm
32339 - 8685 90 24 -22.9 YP_239278       3' arm
32352 - 35586 89 23.5 -23.9 YP_239310       
32343 - 19043 85 23.5 -23.4 YP_239291       3' arm
32319 + 30925 79 23.5 -25.7 YP_239305 5' arm      3' arm
32330 + 47258 85 23.5 -22.8 YP_239326 5' arm      3' arm
32318 + 27914 88 23 -25.6 YP_239300 5' arm      3' arm
32362 - 54866 90 23 -30.1 YP_239350 5' arm      3' arm
32311 + 17872 90 23 -25.7 YP_239291 5' arm      3' arm
32325 + 40375 90 23 -21.5 YP_239315 5' arm      3' arm
32326 + 42621 90 22.5 -22.4 YP_239316 5' arm      3' arm
32314 + 22712 90 22.5 -21.09 YP_239292 5' arm      3' arm
32316 + 25530 90 22.5 -25.6 YP_239297 5' arm      3' arm
32349 - 28921 90 22.5 -24.6 YP_239301 5' arm      3' arm
32321 + 33927 86 22.5 -26.5 YP_239308 5' arm      3' arm
32353 - 40176 86 22.5 -29.1 YP_239314 5' arm      3' arm
32309 + 17095 89 22 -24.6 YP_239289 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.