miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32306	+	12805	89	20.5	-28.9			5' arm      3' arm
32296	+	1448	89	20.5	-26.6			5' arm      3' arm
32298	+	3855	90	20.5	-24.2	YP_239273		5' arm      3' arm
32299	+	6871	87	20.5	-19.7	YP_239276		5' arm      3' arm
32303	+	8695	90	20.5	-19.6	YP_239278		5' arm      3' arm
32347	-	25619	88	20.5	-19.41	YP_239297		5' arm      3' arm
32358	-	47342	85	20.5	-28.9	YP_239326		5' arm      3' arm
32345	-	21817	90	20.5	-29.4	YP_239292		5' arm      3' arm
32307	+	14055	82	20.5	-19.8	YP_239287		5' arm      3' arm
32308	+	14568	86	20.5	-21.7	YP_239287		5' arm      3' arm
32333	-	2603	88	20.5	-19.7	YP_239272		5' arm
32312	+	21895	87	21	-22.5	YP_239292		5' arm      3' arm
32300	+	7123	84	21	-23.7	YP_239276		5' arm      3' arm
32361	-	52419	89	21	-20.4	YP_239344		3' arm
32355	-	43369	89	21	-31.7			5' arm      3' arm
32328	+	43281	89	21	-28.4			5' arm      3' arm
32310	+	17731	85	21	-20.1	YP_239291		5' arm      3' arm
32336	-	3938	77	21	-24	YP_239273		5' arm      3' arm
32313	+	22003	88	21.5	-22.6	YP_239292		5' arm      3' arm
32356	-	43680	88	21.5	-20.7	YP_239317		3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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