miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
834	+	1411	90	21	-19.6	NP_050273		5' arm      3' arm
835	+	2031	87	19.5	-35.3	NP_050176		5' arm      3' arm
836	+	2355	89	19	-26	NP_050273		5' arm      3' arm
837	+	5622	90	19.5	-22.6			5' arm      3' arm
838	+	6427	90	21	-24.2	NP_050277		5' arm      3' arm
839	+	6844	85	19.5	-23.2	NP_050180		5' arm      3' arm
840	+	6965	90	25.5	-20.6	NP_050180		5' arm      3' arm
841	+	8820	87	22	-27.8			5' arm      3' arm
842	+	89319	80	20.5	-25.1	NP_050236		5' arm      3' arm
843	+	99137	88	20.5	-23.3	NP_050241		5' arm      3' arm
844	+	115990	90	24	-25.5	NP_050255		5' arm      3' arm
845	+	129579	89	29	-26.8	NP_050265		5' arm      3' arm
846	+	152197	87	23.5	-23.3	NP_050271		5' arm      3' arm
847	+	152649	84	21.5	-20.8			5' arm      3' arm
848	+	154732	90	21	-19.6	NP_050176		5' arm      3' arm
849	+	155352	87	19.5	-35.3	NP_050273		5' arm      3' arm
850	+	155676	89	19	-26	NP_050176		5' arm      3' arm
851	+	158943	90	19.5	-22.6			5' arm      3' arm
852	+	159748	90	21	-24.2	NP_050180		5' arm      3' arm
853	+	160165	85	19.5	-23.2	NP_050180		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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