miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
68299727 NC_007149.1 Vibriophage VP4

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32563 + 38800 90 25.5 -29.2 5' arm      3' arm
32564 - 19117 89 22.5 -25.2 YP_249587 5' arm      3' arm
32562 + 35634 90 26 -24 YP_418245 5' arm      3' arm
32561 + 19034 83 20 -20 YP_249587 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.