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GenBank Identifier | RefSeq Acc. | Name |
80509240 | NC_007518.1 | Heterocapsa circularisquama RNA virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
33187 | + | 1244 | 90 | 21 | -20.9 | YP_386495 | 5' arm 3' arm | ||
33188 | + | 1785 | 87 | 19 | -23.7 | YP_386495 | 5' arm 3' arm | ||
33189 | + | 2002 | 90 | 21 | -21.4 | YP_386495 | 5' arm 3' arm | ||
33190 | + | 2728 | 85 | 21.5 | -26.7 | YP_386495 | 5' arm 3' arm | ||
33191 | - | 2129 | 89 | 20 | -24.7 | YP_386495 | 5' arm 3' arm | ||
33192 | - | 3284 | 89 | 24.5 | -32.3 | YP_386496 | 5' arm 3' arm | ||
33193 | - | 4149 | 88 | 19 | -21.3 | YP_386496 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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