miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9626041 NC_001354.1 Human papillomavirus - 41

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
2120 + 6490 90 20.5 -19.8 5' arm      3' arm
2123 - 7181 85 19.5 -22.2 5' arm      3' arm
2122 - 4285 85 19 -23.1 NP_040293 5' arm      3' arm
2121 - 1458 90 21.5 -22.3 NP_040287 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.