miRNA display CGI


Results 1 - 9 of 9 are showing below:
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GenBank Identifier RefSeq Acc. Name
20514394 NC_003790.1 Chicken astrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15181 + 9 89 21.5 -28.4 NP_620617 5' arm      3' arm
15182 + 3741 90 21 -19.5 NP_620617 5' arm      3' arm
15183 + 4250 89 20 -21.4 NP_620617 5' arm      3' arm
15184 + 5115 83 19.5 -20.4 NP_620618 5' arm      3' arm
15185 + 5347 87 19 -23.4 NP_620618 5' arm      3' arm
15186 + 5531 89 19 -20.7 NP_620618 5' arm      3' arm
15187 - 134 90 22 -24.7 NP_620617 5' arm      3' arm
15188 - 3088 88 20.5 -24.5 NP_620617 5' arm      3' arm
15189 - 6372 89 22 -26.4 NP_620618 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.