miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9627257 NC_001576.1 Human papillomavirus - 10

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
3408 - 3480 90 23.5 -26.3 NP_041744 5' arm      3' arm
3412 - 7329 89 21 -22.8 NP_041747 5' arm      3' arm
3410 - 4518 90 21 -22.4 NP_041745 5' arm      3' arm
3409 - 3702 89 20.5 -25.6 NP_041744 5' arm      3' arm
3411 - 6392 88 19.5 -33.7 NP_041746 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.