miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9627145 NC_001531.1 Human papillomavirus - 5

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
3256 + 3680 67 20 -30.2 NP_041369 5' arm      3' arm
3257 + 4081 84 22.5 -21.9 NP_041368 5' arm      3' arm
3258 - 3379 90 25.5 -20 NP_041368 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.