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| GenBank Identifier | RefSeq Acc. | Name |
| 9627056 | NC_001522.1 | Bovine papillomavirus - 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 3241 | + | 1674 | 89 | 23 | -23.6 | NP_056739 | 5' arm 3' arm | ||
| 3242 | + | 4625 | 88 | 19 | -30.1 | NP_056743 | 5' arm 3' arm | ||
| 3243 | + | 5890 | 90 | 21 | -26.5 | NP_056744 | 5' arm 3' arm | ||
| 3245 | - | 3352 | 90 | 21 | -33.6 | NP_056741 | 5' arm 3' arm | ||
| 3246 | - | 3503 | 90 | 20 | -26.4 | NP_056740 | 5' arm 3' arm | ||
| 3244 | - | 1761 | 87 | 25 | -21 | NP_056739 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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