miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
6129	-	26133	87	25	-30.5			5' arm      3' arm
6128	-	25362	75	20	-29.9	NP_044852		5' arm      3' arm
6127	-	23739	88	20.5	-21.3	NP_044851		5' arm      3' arm
6126	-	21764	75	20.5	-22.8	NP_044849		5' arm      3' arm
6125	-	19359	90	20.5	-26.8	NP_044849		5' arm      3' arm
6124	-	10925	87	20	-20.8	NP_044845		5' arm      3' arm
6123	-	2091	90	21	-25.1	NP_044841		5' arm      3' arm
6122	+	107597	86	24	-21.7	NP_044915		5' arm      3' arm
6121	+	104676	90	22.5	-25.7	NP_044913		5' arm      3' arm
6120	+	82107	77	19.5	-19.4	NP_044899		5' arm      3' arm
6119	+	78962	90	21.5	-22	NP_044897		5' arm      3' arm
6118	+	74301	86	20.5	-20.5	NP_044893		5' arm      3' arm
6117	+	50200	87	24	-20.7	NP_044870		5' arm      3' arm
6116	+	32453	89	20	-24.5	NP_044858		5' arm      3' arm
6115	+	31959	83	19.5	-25.5	NP_044857		5' arm      3' arm
6114	+	29902	89	21	-21.8	NP_044856		5' arm      3' arm
6113	+	29030	90	20	-22.4	NP_044855		5' arm      3' arm
6112	+	28931	88	20	-22.2	NP_044855		5' arm      3' arm
6111	+	25641	90	19.5	-24.8			5' arm      3' arm
6110	+	13767	89	19	-25.9	NP_044846		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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