miRNA display CGI


Results 1 - 20 of 24 are showing below:
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GenBank Identifier RefSeq Acc. Name
77118167 NC_007456.1 Coliphage K1F

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32998 + 3429 87 21.5 -22.4 YP_338094 5' arm      3' arm
33012 + 30671 87 19 -20.3 YP_338126 5' arm      3' arm
33011 + 29770 89 21.5 -23 YP_338126 5' arm      3' arm
33010 + 29451 90 23.5 -24.9 YP_338126 5' arm      3' arm
33009 + 25287 81 22 -22.2 5' arm      3' arm
33007 + 22290 87 20 -29.5 5' arm      3' arm
33008 + 22716 85 20.5 -20.4 YP_338121 5' arm      3' arm
33006 + 20607 87 21.5 -24.8 YP_338119 5' arm      3' arm
33005 + 18754 90 22 -23.8 YP_338118 5' arm      3' arm
32999 + 4636 89 19.5 -19.7 YP_338094 5' arm      3' arm
33000 + 6455 86 23 -24.4 YP_338096 5' arm      3' arm
33001 + 7082 89 19.5 -21 5' arm      3' arm
33003 + 13290 90 21 -23.8 YP_338108 5' arm      3' arm
33002 + 12922 90 20 -21.5 YP_338108 5' arm      3' arm
33004 + 13444 88 19 -19.4 YP_338108 5' arm      3' arm
33014 - 776 77 19 -28 5' arm      3' arm
33020 - 20891 89 20.5 -24.5 YP_338119 5' arm      3' arm
33019 - 19934 89 19.5 -21.3 YP_338118 5' arm      3' arm
33018 - 15528 83 20.5 -25.8 YP_338110 5' arm      3' arm
33017 - 9334 89 20 -19.9 YP_338103 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.