miRNA display CGI


Results 1 - 20 of 149 are showing below:
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GenBank Identifier RefSeq Acc. Name
77864625 NC_007497.1 Burkholderia cepacia phage Bcep176

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
33107 - 7263 90 19 -23.1 YP_355352 5' arm      3' arm
33103 - 4642 89 19 -20.1 YP_355345 5' arm      3' arm
33039 + 10481 89 19 -21.6 YP_355360 5' arm      3' arm
33078 + 34704 90 19 -24.5 YP_355403 5' arm      3' arm
33096 + 44346 90 19 -27.2 YP_355416 5' arm      3' arm
33074 + 33028 88 19 -28.4 YP_355403 5' arm      3' arm
33125 - 17800 89 19 -22.3 YP_355381 5' arm      3' arm
33157 - 31914 89 19 -29.2 YP_355402 5' arm      3' arm
33105 - 6836 86 19 -19.6 YP_355351 5' arm      3' arm
33113 - 11119 80 19 -21.9 YP_355362 5' arm      3' arm
33166 - 36083 88 19 -25.3 YP_355403 5' arm      3' arm
33066 + 27285 87 19 -25.3 YP_355397 5' arm      3' arm
33065 + 26292 82 19 -25.7 YP_355397 5' arm      3' arm
33129 - 21552 90 19 -24.2 YP_355388 5' arm      3' arm
33115 - 12399 90 19 -21.6 YP_355368 5' arm      3' arm
33030 + 1736 86 19 -22 YP_355339 5' arm      3' arm
33149 - 28057 89 19 -21 YP_355397 5' arm      3' arm
33036 + 5672 89 19 -21.2 5' arm      3' arm
33050 + 16844 87 19.5 -21.4 YP_355381 5' arm      3' arm
33099 - 691 90 19.5 -28.4 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.