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| GenBank Identifier | RefSeq Acc. | Name |
| 77864625 | NC_007497.1 | Burkholderia cepacia phage Bcep176 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 33103 | - | 4642 | 89 | 19 | -20.1 | YP_355345 | 5' arm 3' arm | ||
| 33104 | - | 6016 | 90 | 22.5 | -20 | YP_355349 | 5' arm 3' arm | ||
| 33037 | + | 6169 | 87 | 22 | -28.9 | YP_355349 | 5' arm 3' arm | ||
| 33038 | + | 6887 | 85 | 19.5 | -21.8 | YP_355351 | 5' arm 3' arm | ||
| 33105 | - | 6836 | 86 | 19 | -19.6 | YP_355351 | 5' arm 3' arm | ||
| 33106 | - | 6957 | 90 | 24.5 | -22.1 | YP_355351 | 5' arm 3' arm | ||
| 33107 | - | 7263 | 90 | 19 | -23.1 | YP_355352 | 5' arm 3' arm | ||
| 33108 | - | 8472 | 89 | 20 | -23.3 | YP_355355 | 5' arm 3' arm | ||
| 33109 | - | 8720 | 90 | 21 | -20.7 | YP_355355 | 5' arm 3' arm | ||
| 33110 | - | 8893 | 89 | 20 | -26.5 | YP_355356 | 5' arm 3' arm | ||
| 33111 | - | 9066 | 89 | 20.5 | -20.1 | YP_355356 | 5' arm 3' arm | ||
| 33039 | + | 10481 | 89 | 19 | -21.6 | YP_355360 | 5' arm 3' arm | ||
| 33113 | - | 11119 | 80 | 19 | -21.9 | YP_355362 | 5' arm 3' arm | ||
| 33041 | + | 11600 | 85 | 20.5 | -20.8 | YP_355364 | 5' arm 3' arm | ||
| 33115 | - | 12399 | 90 | 19 | -21.6 | YP_355368 | 5' arm 3' arm | ||
| 33116 | - | 13369 | 90 | 19.5 | -19.4 | YP_355371 | 5' arm 3' arm | ||
| 33043 | + | 13479 | 88 | 21.5 | -25.8 | YP_355371 | 5' arm 3' arm | ||
| 33118 | - | 14426 | 90 | 22.5 | -20.2 | YP_355372 | 5' arm 3' arm | ||
| 33117 | - | 14157 | 86 | 20.5 | -22.5 | YP_355372 | 5' arm 3' arm | ||
| 33044 | + | 14264 | 84 | 19.5 | -26.4 | YP_355372 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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