miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
82547780 NC_007612.1 Bovine papillomavirus - 7

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
33642 - 570 89 22 -22.6 YP_406558 5' arm      3' arm
33643 - 3297 90 22.5 -20.3 YP_406560 5' arm      3' arm
33641 + 2660 84 20 -20.2 YP_406560 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.