miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
10261	-	43964	90	25.5	-30.9			5' arm      3' arm
10262	-	44872	87	23	-31.2			5' arm      3' arm
10263	-	66794	83	20.5	-23.3	NP_077452		5' arm      3' arm
10264	-	84465	89	19	-20.9	NP_077461		5' arm      3' arm
10265	-	104760	90	20.5	-22.2	NP_077485		5' arm      3' arm
10266	-	104859	87	21.5	-20.4	NP_077485		5' arm      3' arm
10267	-	105479	90	21	-27.7	NP_077485		5' arm      3' arm
10268	-	105635	87	22	-30.7	NP_077476		5' arm      3' arm
10269	-	105834	87	19	-20.1	NP_077476		5' arm      3' arm
10270	-	106192	87	20.5	-23.5	NP_077485		5' arm      3' arm
10271	-	106756	89	20	-23.5	NP_077476		5' arm      3' arm
10272	-	107116	90	19.5	-22.4	NP_077476		5' arm      3' arm
10273	-	108402	90	22	-21.7	NP_077476		5' arm      3' arm
10274	-	110262	90	22.5	-23.9	NP_077477		5' arm      3' arm
10275	-	110584	89	25.5	-25	NP_077484		5' arm      3' arm
10276	-	120313	89	24	-26	NP_077485		5' arm      3' arm
10277	-	120563	87	20.5	-24.9	NP_077485		5' arm      3' arm
10278	-	120921	80	19	-32.7	NP_077485		5' arm      3' arm
10279	-	121014	90	21	-25.5	NP_077476		5' arm      3' arm
10280	-	121619	89	20.5	-32.4	NP_077485		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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