miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
9759	-	134607	86	19	-20.9	NP_066917		5' arm      3' arm
9761	-	136588	88	23	-35.4	NP_066916		5' arm      3' arm
9773	-	157526	89	19	-24.2	NP_066916		5' arm      3' arm
9780	-	161776	89	19.5	-22.2	NP_066916		5' arm      3' arm
9748	-	124782	86	20	-21.9	NP_066824		5' arm      3' arm
9752	-	128088	90	23	-29.7			5' arm      3' arm
9763	-	137354	90	19.5	-25	NP_066903		5' arm      3' arm
9778	-	161462	89	20	-20.4	NP_066903		5' arm      3' arm
9756	-	130443	89	23	-23.7	NP_066819		5' arm      3' arm
9779	-	161624	89	21	-21.7	NP_066903		5' arm      3' arm
9764	-	137739	87	19	-29.8	NP_066916		5' arm      3' arm
9758	-	130875	90	25.5	-30.9			5' arm      3' arm
9767	-	140086	89	19.5	-20.1	NP_066903		5' arm      3' arm
9770	-	154729	89	24.5	-20			5' arm      3' arm
9777	-	159299	89	21	-20.3	NP_066916		5' arm      3' arm
9775	-	158417	84	24	-27	NP_066903		5' arm      3' arm
9744	-	122624	88	20.5	-28.4			5' arm      3' arm
9746	-	123401	87	20	-23.4	NP_066893		5' arm      3' arm
9750	-	125174	90	26	-24.1	NP_066896		5' arm      3' arm
9755	-	129076	86	21	-28.1			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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