miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
9594	+	8409	90	26	-24.1	NP_066896		5' arm      3' arm
9590	+	4641	90	19.5	-22.66			5' arm      3' arm
9589	+	4507	86	21	-28.1			5' arm      3' arm
9588	+	3140	89	23	-23.7	NP_066819		5' arm      3' arm
9587	+	2851	90	24.5	-36.5	NP_066819		5' arm      3' arm
9600	+	10959	88	20.5	-28.4			5' arm      3' arm
9598	+	10182	87	20	-23.4	NP_066826		5' arm      3' arm
9614	+	57828	86	19.5	-30.4	NP_066857		5' arm      3' arm
9613	+	57673	85	19.5	-20.8	NP_066857		5' arm      3' arm
9612	+	46578	88	19.5	-19.6	NP_066849		5' arm      3' arm
9610	+	41061	89	20	-34.3	NP_066845		5' arm      3' arm
9611	+	44356	90	22	-21.3	NP_066849		5' arm      3' arm
9608	+	40225	89	21	-20.5	NP_066847		5' arm      3' arm
9609	+	40833	81	22	-20.5	NP_066845		5' arm      3' arm
9607	+	35361	90	21	-21.7	NP_066844		5' arm      3' arm
9606	+	33298	90	21	-22.4	NP_066842		5' arm      3' arm
9605	+	24740	89	22.5	-20.2	NP_066836		5' arm      3' arm
9603	+	19100	90	19.5	-21.8	NP_066833		5' arm      3' arm
9604	+	20996	88	24.5	-35.7	NP_066835		5' arm      3' arm
9602	+	15549	90	21.5	-19.8	NP_066829		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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