miRNA display CGI


Results 1 - 20 of 102 are showing below:
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GenBank Identifier RefSeq Acc. Name
10140926 NC_002531.1 Alcelaphine herpesvirus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
9464 - 159 90 23.5 -29.3 5' arm      3' arm
9477 - 28281 90 30 -26.2 5' arm      3' arm
9511 - 113524 89 23.5 -20.8 5' arm      3' arm
9490 - 57343 88 21.5 -31.5 5' arm      3' arm
9485 - 32409 90 25 -31.1 5' arm      3' arm
9510 - 112351 81 23 -21.4 5' arm      3' arm
9512 - 121102 90 21 -31.4 5' arm      3' arm
9450 + 115819 87 20.5 -19.63 5' arm      3' arm
9453 + 121018 80 22 -28.6 5' arm      3' arm
9476 - 28159 88 34.5 -32.6 5' arm      3' arm
9423 + 32321 86 23.5 -35 5' arm      3' arm
9421 + 29854 88 19.5 -29.4 5' arm      3' arm
9413 + 431 87 27 -23.7 5' arm      3' arm
9475 - 28022 89 26.5 -22.2 5' arm      3' arm
9480 - 29378 89 26.5 -22.9 5' arm      3' arm
9478 - 28912 89 29 -20.9 5' arm      3' arm
9481 - 29945 89 27 -24.7 5' arm      3' arm
9420 + 29169 84 24.5 -31 5' arm      3' arm
9419 + 29024 88 22 -20.32 5' arm      3' arm
9422 + 30018 89 20.5 -24.1 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.