miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
9433	+	42893	87	23.5	-20.5	NP_065522		5' arm      3' arm
9434	+	49360	87	19	-21.7	NP_065524		5' arm      3' arm
9435	+	54776	90	24	-27.1	NP_065530		5' arm      3' arm
9436	+	56817	87	21	-24.5	NP_065527		5' arm      3' arm
9437	+	57995	89	19	-26.6	NP_065533		5' arm      3' arm
9438	+	60069	85	21.5	-24.46	NP_065535		5' arm      3' arm
9439	+	61846	89	20	-21.8	NP_065537		5' arm      3' arm
9440	+	62902	90	20	-22.5	NP_065538		5' arm      3' arm
9441	+	67403	87	21	-24.9	NP_065542		5' arm      3' arm
9442	+	69336	90	22	-25.5	NP_065543		5' arm      3' arm
9443	+	88742	90	20	-22.9	NP_065559		5' arm      3' arm
9444	+	91045	88	20	-29.8	NP_065560		5' arm      3' arm
9445	+	94723	88	20	-26.9	NP_065562		5' arm      3' arm
9446	+	96096	90	20	-23.1	NP_065563		5' arm      3' arm
9447	+	103499	84	22.5	-21	NP_065564		5' arm      3' arm
9448	+	104456	90	19.5	-20.2	NP_065565		5' arm      3' arm
9449	+	109913	90	20	-22.9			5' arm      3' arm
9450	+	115819	87	20.5	-19.63			5' arm      3' arm
9451	+	116700	90	22	-20.2	NP_065570		5' arm      3' arm
9452	+	119663	85	20	-30.42	NP_065570		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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