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| GenBank Identifier | RefSeq Acc. | Name |
| 22212887 | NC_004106.1 | Paprika mild mottle virus |
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| ID |
strand
|
start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 16550 | + | 3501 | 88 | 27.5 | -20.7 | NP_671718 | 5' arm 3' arm | ||
| 16551 | + | 3619 | 89 | 19.5 | -19.6 | NP_671718 | 5' arm 3' arm | ||
| 16549 | + | 573 | 88 | 19 | -25.9 | NP_671718 | 5' arm 3' arm | ||
| 16552 | - | 3084 | 90 | 22 | -25.1 | NP_671719 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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