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| GenBank Identifier | RefSeq Acc. | Name |
| 19550999 | NC_003448.1 | Striped Jack nervous necrosis virus RNA1 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 13590 | + | 171 | 86 | 21.5 | -24.5 | NP_599247 | 5' arm 3' arm | ||
| 13591 | + | 2483 | 88 | 26 | -22 | NP_599247 | 5' arm 3' arm | ||
| 13592 | + | 2909 | 87 | 20.5 | -25.1 | NP_599247 | 5' arm 3' arm | ||
| 13593 | - | 1259 | 88 | 20 | -27.6 | NP_599247 | 5' arm 3' arm | ||
| 13594 | - | 1603 | 89 | 21.5 | -26.4 | NP_599247 | 5' arm 3' arm | ||
| 13595 | - | 2845 | 86 | 23.5 | -29.8 | NP_599248 | 5' arm 3' arm | ||
| 13596 | - | 2996 | 89 | 23 | -25.8 | NP_599248 | 5' arm 3' arm | ||
| 13597 | + | 1215 | 84 | 20.5 | -21.4 | 5' arm 3' arm | |||
| 13598 | - | 313 | 90 | 24.5 | -23.4 | NP_599249 | 5' arm 3' arm | ||
| 13599 | - | 495 | 89 | 23 | -30.9 | NP_599249 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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