miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11910	+	1255	89	22.5	-33			5' arm      3' arm
11942	-	110	88	20.5	-22.2			5' arm      3' arm
11963	-	7989	89	25	-21.1			5' arm      3' arm
11909	+	625	90	21	-23.7	NP_490598		5' arm      3' arm
11943	-	712	87	20.5	-21.4	NP_490598		5' arm      3' arm
11911	+	1869	87	23.5	-20.1	NP_490599		5' arm      3' arm
11944	-	2171	90	19	-21.3	NP_490599		5' arm      3' arm
11949	-	4273	87	21.5	-24.7	NP_490600		5' arm      3' arm
11948	-	3198	90	22	-27.5	NP_490600		5' arm      3' arm
11913	+	3215	89	22.5	-22.2	NP_490600		5' arm      3' arm
11914	+	3884	90	22	-26.5	NP_490600		5' arm      3' arm
11945	-	2719	87	20	-24.2	NP_490600		5' arm      3' arm
11946	-	2968	79	19.5	-30.7	NP_490600		5' arm      3' arm
11915	+	4187	90	21	-22	NP_490600		5' arm      3' arm
11912	+	2799	87	19.5	-30.7	NP_490600		5' arm      3' arm
11947	-	3086	90	26.5	-20.1	NP_490600		5' arm      3' arm
11950	-	4546	88	22	-33.3	NP_490601		5' arm      3' arm
11951	-	4791	88	21.5	-23.7	NP_490601		5' arm      3' arm
11916	+	5918	90	20.5	-22.72	NP_490602		5' arm      3' arm
11956	-	6009	90	23	-29.8	NP_490602		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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