miRNA display CGI


Results 1 - 20 of 126 are showing below:
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GenBank Identifier RefSeq Acc. Name
17313217 NC_003278.1 Bacteriophage phi CTX

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11950 - 4546 88 22 -33.3 NP_490601 5' arm      3' arm
11910 + 1255 89 22.5 -33 5' arm      3' arm
11999 - 19502 89 24.5 -33 NP_490625 5' arm      3' arm
12028 - 31906 90 22 -32.5 NP_490641 5' arm      3' arm
11989 - 16732 90 23 -31.7 NP_490620 5' arm      3' arm
11946 - 2968 79 19.5 -30.7 NP_490600 5' arm      3' arm
11912 + 2799 87 19.5 -30.7 NP_490600 5' arm      3' arm
11971 - 10633 89 23.5 -30.3 NP_490613 5' arm      3' arm
11956 - 6009 90 23 -29.8 NP_490602 5' arm      3' arm
12017 - 27557 89 20 -29.3 NP_490635 5' arm      3' arm
11980 - 13170 89 20 -29.2 NP_490617 5' arm      3' arm
11960 - 6585 89 24.5 -29.1 NP_490603 5' arm      3' arm
11979 - 13011 88 22 -28.7 NP_490617 5' arm      3' arm
11952 - 5359 87 22 -28.6 NP_490602 5' arm      3' arm
11921 + 10077 90 19 -28.4 NP_490612 5' arm      3' arm
11975 - 12475 86 22 -28.4 NP_490616 5' arm      3' arm
11924 + 13131 80 21.5 -28.1 NP_490617 5' arm      3' arm
12021 - 29873 88 21.5 -28 NP_490637 5' arm      3' arm
11969 - 9856 90 21.5 -27.6 NP_490610 5' arm      3' arm
11948 - 3198 90 22 -27.5 NP_490600 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.