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GenBank Identifier | RefSeq Acc. | Name |
10314005 | NC_002551.1 | Vesicular exanthema of swine virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
9545 | + | 63 | 88 | 21.5 | -28.2 | NP_066255 | 5' arm 3' arm | ||
9546 | + | 1715 | 90 | 19 | -19.7 | NP_066255 | 5' arm 3' arm | ||
9547 | + | 2970 | 88 | 21 | -27.9 | NP_066255 | 5' arm 3' arm | ||
9548 | + | 3889 | 90 | 22.5 | -21.9 | NP_066255 | 5' arm 3' arm | ||
9549 | + | 6060 | 88 | 20 | -20.1 | NP_066256 | 5' arm 3' arm | ||
9550 | + | 6407 | 88 | 20 | -24.3 | NP_066256 | 5' arm 3' arm | ||
9551 | - | 148 | 83 | 21.5 | -25.7 | NP_066255 | 5' arm 3' arm | ||
9552 | - | 536 | 90 | 20.5 | -19.7 | NP_066255 | 5' arm 3' arm | ||
9553 | - | 1811 | 89 | 21 | -20.2 | NP_066255 | 5' arm 3' arm | ||
9554 | - | 3375 | 86 | 21 | -27 | NP_066255 | 5' arm 3' arm | ||
9555 | - | 4636 | 89 | 21.5 | -19.8 | NP_066255 | 5' arm 3' arm | ||
9556 | - | 6014 | 88 | 21.5 | -26.6 | NP_066256 | 5' arm 3' arm | ||
9557 | - | 6259 | 88 | 21.5 | -20.1 | NP_066256 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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