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GenBank Identifier | RefSeq Acc. | Name |
9695413 | NC_001824.1 | Lymphocystis disease virus 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
6090 | + | 29260 | 90 | 24 | -26.6 | NP_078660 | 5' arm 3' arm | ||
6091 | + | 29364 | 88 | 22 | -35 | NP_078660 | 5' arm 3' arm | ||
6092 | + | 29744 | 90 | 22 | -21.6 | NP_078660 | 5' arm 3' arm | ||
6093 | + | 80349 | 90 | 20.5 | -19.4 | NP_078745 | 5' arm 3' arm | ||
6094 | + | 87244 | 89 | 24.5 | -24.3 | NP_078749 | 5' arm 3' arm | ||
6095 | + | 99062 | 89 | 32 | -25.2 | 5' arm 3' arm | |||
6096 | - | 29349 | 90 | 24 | -27.5 | NP_078660 | 5' arm 3' arm | ||
6097 | - | 30004 | 90 | 19.5 | -28.3 | NP_078660 | 5' arm 3' arm | ||
6098 | - | 34891 | 89 | 26 | -20.3 | NP_078673 | 5' arm 3' arm | ||
6099 | - | 99150 | 89 | 29 | -19.7 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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