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| GenBank Identifier | RefSeq Acc. | Name |
| 12084824 | NC_002641.1 | Meleagrid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 9892 | + | 122658 | 89 | 28 | -29 | 5' arm 3' arm | |||
| 9967 | - | 150279 | 90 | 21 | -29 | NP_073366 | 5' arm 3' arm | ||
| 9920 | - | 1029 | 89 | 28 | -29 | 5' arm 3' arm | |||
| 9880 | + | 109319 | 89 | 21 | -28.94 | NP_073349 | 5' arm 3' arm | ||
| 9947 | - | 117991 | 88 | 21.5 | -28.1 | 5' arm 3' arm | |||
| 9870 | + | 5696 | 88 | 21.5 | -28.1 | 5' arm 3' arm | |||
| 9952 | - | 125089 | 90 | 20.5 | -27.8 | NP_073364 | 5' arm 3' arm | ||
| 9918 | + | 157507 | 90 | 20.5 | -27.8 | NP_073365 | 5' arm 3' arm | ||
| 9954 | - | 125414 | 88 | 22 | -27.7 | NP_073365 | 5' arm 3' arm | ||
| 9916 | + | 157182 | 88 | 22 | -27.7 | NP_073382 | 5' arm 3' arm | ||
| 9874 | + | 36828 | 90 | 22 | -27.3 | 5' arm 3' arm | |||
| 9936 | - | 56177 | 89 | 19.5 | -27.3 | NP_073322 | 5' arm 3' arm | ||
| 9881 | + | 117738 | 89 | 24.5 | -27.1 | 5' arm 3' arm | |||
| 9917 | + | 157361 | 89 | 19.5 | -27 | NP_073365 | 5' arm 3' arm | ||
| 9953 | - | 125235 | 89 | 19.5 | -27 | NP_073383 | 5' arm 3' arm | ||
| 9882 | + | 117907 | 86 | 20.5 | -26.8 | 5' arm 3' arm | |||
| 9930 | - | 5780 | 86 | 20.5 | -26.8 | 5' arm 3' arm | |||
| 9889 | + | 121856 | 87 | 23.5 | -26.6 | 5' arm 3' arm | |||
| 9923 | - | 1831 | 87 | 23.5 | -26.6 | 5' arm 3' arm | |||
| 9866 | + | 1237 | 86 | 20.5 | -26.2 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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