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GenBank Identifier | RefSeq Acc. | Name |
27754751 | NC_004162.2 | Chikungunya virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
16708 | - | 5214 | 89 | 23 | -22.6 | NP_690588 | 5' arm 3' arm | ||
16709 | - | 7118 | 90 | 22.5 | -27.9 | NP_690588 | 5' arm 3' arm | ||
16710 | - | 7749 | 90 | 22.5 | -19.9 | NP_690589 | 5' arm 3' arm | ||
16711 | - | 8995 | 90 | 19 | -20.5 | NP_690589 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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