miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
20376947 NC_003723.1 Potato mop-top virus RNA 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15061 + 5119 87 22 -24.7 NP_620444 5' arm      3' arm
15062 + 855 89 21.5 -21.8 NP_620445 5' arm      3' arm
15063 + 1525 90 20 -19.6 NP_620445 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.