miRNA display CGI


Results 1 - 18 of 18 are showing below:
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GenBank Identifier RefSeq Acc. Name
9632270 NC_001981.1 Helicoverpa armigera stunt virus RNA 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8226 + 25 89 19 -27.9 NP_049235 5' arm      3' arm
8227 + 3556 77 19.5 -29.6 NP_049235 5' arm      3' arm
8228 + 4020 87 22.5 -21.2 NP_049235 5' arm      3' arm
8229 - 286 89 19.5 -20.3 NP_049235 5' arm      3' arm
8230 - 661 86 19 -19.5 NP_049235 5' arm      3' arm
8231 - 869 88 23.5 -32.1 NP_049235 5' arm      3' arm
8232 - 1276 90 19.5 -21.1 NP_049235 5' arm      3' arm
8233 - 1788 90 21 -20.01 NP_049235 5' arm      3' arm
8234 - 2534 89 19 -20.7 NP_049235 5' arm      3' arm
8235 - 3164 90 22 -21.2 NP_049235 5' arm      3' arm
8236 - 3638 90 20.5 -22.9 NP_049235 5' arm      3' arm
8237 - 4383 89 19 -21.1 NP_049235 5' arm      3' arm
8238 - 4701 88 20 -28 NP_049235 5' arm      3' arm
8239 - 4843 90 22.5 -23.3 NP_049235 5' arm      3' arm
8240 + 1264 90 21 -26.8 NP_049237 5' arm      3' arm
8241 - 632 87 19.5 -22.5 NP_049236 5' arm      3' arm
8242 - 724 88 21 -21.3 NP_049236 5' arm      3' arm
8243 - 939 90 21.5 -24.7 NP_049237 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.