miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13354	+	132813	90	22	-28.4	NP_572132		5' arm      3' arm
13357	+	133795	90	19	-28.3	NP_572132		5' arm      3' arm
13337	+	117680	86	22	-28.3			5' arm      3' arm
13317	+	67743	87	19	-28.2	NP_572098		5' arm      3' arm
13300	+	49012	68	19	-28.2	NP_572080		5' arm      3' arm
13410	-	85343	87	20	-28.1			5' arm      3' arm
13296	+	41647	89	19.5	-28	NP_572076		5' arm      3' arm
13289	+	33629	87	23	-28	NP_572071		5' arm      3' arm
13374	-	23433	89	19.5	-27.9			5' arm      3' arm
13340	+	119582	89	19.5	-27.9			5' arm      3' arm
13318	+	67870	85	21	-27.8	NP_572098		5' arm      3' arm
13356	+	133539	81	21.5	-27.7	NP_572132		5' arm      3' arm
13390	-	49090	90	19.5	-27.6	NP_572080		5' arm      3' arm
13310	+	59091	90	26.5	-27.6	NP_572092		5' arm      3' arm
13331	+	100988	90	21.5	-27.4	NP_572118		5' arm      3' arm
13307	+	54273	83	25.5	-27	NP_572086		5' arm      3' arm
13336	+	115877	90	19	-26.9	NP_572124		5' arm      3' arm
13345	+	125893	90	22.5	-26.9	NP_572129		5' arm      3' arm
13372	-	22248	87	20	-26.9			5' arm      3' arm
13280	+	23974	89	27.5	-26.9			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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