miRNA display CGI


Results 41 - 60 of 196 are showing below:
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GenBank Identifier RefSeq Acc. Name
18845965 NC_003409.1 Human herpesvirus 8

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
13313 + 65054 89 19 -25.4 NP_572097 5' arm      3' arm
13314 + 66436 86 19.5 -21.9 NP_572097 5' arm      3' arm
13315 + 66699 90 21.5 -20.2 NP_572097 5' arm      3' arm
13316 + 67602 90 21 -19.9 NP_572098 5' arm      3' arm
13317 + 67743 87 19 -28.2 NP_572098 5' arm      3' arm
13318 + 67870 85 21 -27.8 NP_572098 5' arm      3' arm
13319 + 68349 89 22 -20.7 NP_572098 5' arm      3' arm
13320 + 76861 90 19.5 -25.8 NP_572105 5' arm      3' arm
13321 + 78856 89 19.5 -21.6 NP_572108 5' arm      3' arm
13322 + 80484 88 20.5 -21.1 NP_572109 5' arm      3' arm
13323 + 85255 89 20.5 -21.3 5' arm      3' arm
13324 + 86177 89 23 -25.4 NP_572112 5' arm      3' arm
13325 + 86643 90 21.5 -26.2 NP_572112 5' arm      3' arm
13326 + 87685 90 23 -25.7 NP_572112 5' arm      3' arm
13327 + 88012 87 20.5 -31.1 NP_572112 5' arm      3' arm
13328 + 89886 77 19.5 -19.7 5' arm      3' arm
13329 + 95613 90 24 -24.7 NP_572115 5' arm      3' arm
13330 + 97859 90 22.5 -21.6 NP_572117 5' arm      3' arm
13331 + 100988 90 21.5 -27.4 NP_572118 5' arm      3' arm
13332 + 107598 89 23 -21.1 NP_572120 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.