miRNA display CGI


Results 1 - 20 of 32 are showing below:
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GenBank Identifier RefSeq Acc. Name
9634155 NC_002167.1 Bacteriophage HK97

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8469 + 37558 90 21.5 -23.5 5' arm      3' arm
8476 - 21109 88 25 -28.5 5' arm      3' arm
8478 - 26618 89 19.5 -20.8 5' arm      3' arm
8474 - 15071 88 19 -24.3 5' arm      3' arm
8451 + 5155 86 19 -30.2 5' arm      3' arm
8470 - 3113 85 22.5 -21.8 NP_037699 5' arm      3' arm
8449 + 2100 90 20 -21.7 NP_037699 5' arm      3' arm
8450 + 2620 89 20 -25.2 NP_037699 5' arm      3' arm
8452 + 5319 89 19.5 -19.9 NP_037702 5' arm      3' arm
8453 + 7868 90 19.5 -19.7 NP_037707 5' arm      3' arm
8472 - 10804 89 24 -23.4 NP_037710 5' arm      3' arm
8471 - 9531 90 19 -22.1 NP_037710 5' arm      3' arm
8454 + 11928 82 19.5 -27.2 NP_037711 5' arm      3' arm
8455 + 12471 87 20.5 -21.3 NP_037712 5' arm      3' arm
8456 + 12852 87 23 -21.9 NP_037713 5' arm      3' arm
8457 + 13088 87 21.5 -22.5 NP_037713 5' arm      3' arm
8473 - 14379 90 23.5 -21.5 NP_037714 5' arm      3' arm
8458 + 14179 86 24 -26.8 NP_037714 5' arm      3' arm
8463 + 17340 87 19.5 -20.02 NP_037717 5' arm      3' arm
8461 + 16959 86 19.5 -20.5 NP_037717 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.