miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8474	-	15071	88	19	-24.3			5' arm      3' arm
8460	+	16623	90	19	-25.8	NP_037717		5' arm      3' arm
8464	+	18373	77	19	-22.5	NP_037717		5' arm      3' arm
8451	+	5155	86	19	-30.2			5' arm      3' arm
8471	-	9531	90	19	-22.1	NP_037710		5' arm      3' arm
8463	+	17340	87	19.5	-20.02	NP_037717		5' arm      3' arm
8454	+	11928	82	19.5	-27.2	NP_037711		5' arm      3' arm
8466	+	20716	89	19.5	-21.5	NP_037719		5' arm      3' arm
8478	-	26618	89	19.5	-20.8			5' arm      3' arm
8453	+	7868	90	19.5	-19.7	NP_037707		5' arm      3' arm
8452	+	5319	89	19.5	-19.9	NP_037702		5' arm      3' arm
8468	+	32233	82	19.5	-24.2	NP_037742		5' arm      3' arm
8461	+	16959	86	19.5	-20.5	NP_037717		5' arm      3' arm
8449	+	2100	90	20	-21.7	NP_037699		5' arm      3' arm
8479	-	28646	90	20	-20	NP_037735		5' arm      3' arm
8450	+	2620	89	20	-25.2	NP_037699		5' arm      3' arm
8459	+	16238	90	20.5	-21.3	NP_037717		5' arm      3' arm
8455	+	12471	87	20.5	-21.3	NP_037712		5' arm      3' arm
8477	-	23774	87	21	-23.2	NP_037724		5' arm      3' arm
8457	+	13088	87	21.5	-22.5	NP_037713		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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