miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
10526	-	198946	90	19	-26	NP_077641		5' arm      3' arm
10546	-	230644	84	19	-21			5' arm      3' arm
10540	-	220962	87	19	-22.7	NP_597943		5' arm      3' arm
10295	+	25439	89	19	-20.3	NP_077497		5' arm      3' arm
10426	+	309643	89	19	-21.6			5' arm      3' arm
10433	+	332092	86	19	-22.1			5' arm      3' arm
10349	+	167258	84	19	-23	NP_077623		5' arm      3' arm
10404	+	275420	89	19	-20.4	NP_077684		5' arm      3' arm
10569	-	297248	86	19	-24.4	NP_077695		5' arm      3' arm
10292	+	17825	90	19	-19.5	NP_077492		5' arm      3' arm
10525	-	195345	87	19	-21.6	NP_597943		5' arm      3' arm
10353	+	181773	90	19	-34.4	NP_077636		5' arm      3' arm
10388	+	238912	84	19	-20.8	NP_077657		5' arm      3' arm
10285	+	3208	87	19	-20.2	NP_077486		5' arm      3' arm
10323	+	90941	86	19	-23.1	NP_077548		5' arm      3' arm
10571	-	297923	89	19	-22.8	NP_077695		5' arm      3' arm
10288	+	9980	89	19	-23.6	NP_597942		5' arm      3' arm
10289	+	10576	89	19	-20.4	NP_597942		5' arm      3' arm
10434	+	332185	87	19	-22.5			5' arm      3' arm
10572	-	300905	86	19	-20.9	NP_077698		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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