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GenBank Identifier | RefSeq Acc. | Name |
34610114 | NC_005093.1 | Hirame rhabdovirus |
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ID![]() |
strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
22768 | + | 2655 | 89 | 21.5 | -29.2 | NP_919032 | 5' arm 3' arm | ||
22769 | + | 6812 | 88 | 20 | -26.2 | NP_919035 | 5' arm 3' arm | ||
22770 | - | 665 | 90 | 19 | -23.2 | NP_919030 | 5' arm 3' arm | ||
22771 | - | 1956 | 88 | 24.5 | -22.7 | NP_919031 | 5' arm 3' arm | ||
22772 | - | 2589 | 89 | 21.5 | -23.8 | NP_919032 | 5' arm 3' arm | ||
22773 | - | 2744 | 89 | 21 | -22 | NP_919032 | 5' arm 3' arm | ||
22774 | - | 7598 | 90 | 19.5 | -26.1 | NP_919035 | 5' arm 3' arm | ||
22775 | - | 10756 | 89 | 20 | -21.7 | NP_919035 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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