miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9628649 NC_001701.1 Goose parvovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
4237 - 3593 89 21.5 -22 NP_043515 5' arm      3' arm
4236 - 432 90 19 -23.2 5' arm      3' arm
4235 + 4675 90 19 -23.2 5' arm      3' arm
4234 + 2048 88 19.5 -22.2 NP_043514 5' arm      3' arm
4233 + 608 90 21 -20.4 NP_043514 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.