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GenBank Identifier | RefSeq Acc. | Name |
9629718 | NC_001837.1 | Hepatitis GB virus A |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
6160 | + | 28 | 88 | 19.5 | -20.3 | 5' arm 3' arm | |||
6161 | + | 141 | 89 | 21.5 | -22 | 5' arm 3' arm | |||
6162 | + | 320 | 87 | 20 | -22.5 | 5' arm 3' arm | |||
6163 | + | 487 | 90 | 21 | -26.6 | 5' arm 3' arm | |||
6164 | + | 1285 | 90 | 23 | -20 | NP_045010 | 5' arm 3' arm | ||
6165 | + | 1391 | 86 | 19 | -21.3 | NP_045010 | 5' arm 3' arm | ||
6166 | + | 1499 | 90 | 22.5 | -29.9 | NP_045010 | 5' arm 3' arm | ||
6167 | + | 1832 | 90 | 19.5 | -20.1 | NP_045010 | 5' arm 3' arm | ||
6168 | + | 2053 | 90 | 27 | -26.9 | NP_045010 | 5' arm 3' arm | ||
6169 | + | 2465 | 89 | 22.5 | -35.9 | NP_045010 | 5' arm 3' arm | ||
6170 | + | 2610 | 88 | 26 | -34 | NP_045010 | 5' arm 3' arm | ||
6171 | + | 2903 | 90 | 19 | -32.8 | 5' arm 3' arm | |||
6172 | + | 3161 | 90 | 20 | -19.4 | NP_045010 | 5' arm 3' arm | ||
6173 | + | 3849 | 88 | 19.5 | -21.9 | NP_045010 | 5' arm 3' arm | ||
6174 | + | 4280 | 90 | 23 | -24.6 | NP_045010 | 5' arm 3' arm | ||
6175 | + | 4512 | 90 | 20 | -26.5 | NP_045010 | 5' arm 3' arm | ||
6176 | + | 4825 | 89 | 21.5 | -23.4 | NP_045010 | 5' arm 3' arm | ||
6177 | + | 5112 | 89 | 21 | -20.2 | NP_045010 | 5' arm 3' arm | ||
6178 | + | 5360 | 90 | 22.5 | -27.5 | NP_045010 | 5' arm 3' arm | ||
6179 | + | 5883 | 86 | 23.5 | -28.8 | NP_045010 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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