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GenBank Identifier | RefSeq Acc. | Name |
9628101 | NC_001655.1 | Hepatitis GB virus B |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
4095 | - | 6870 | 90 | 20 | -19.7 | NP_056931 | 5' arm 3' arm | ||
4096 | - | 8711 | 90 | 19 | -20.3 | NP_056931 | 5' arm 3' arm | ||
4082 | + | 125 | 84 | 21.5 | -21.3 | 5' arm 3' arm | |||
4085 | + | 2031 | 84 | 19 | -21.3 | NP_056931 | 5' arm 3' arm | ||
4094 | - | 301 | 89 | 21 | -21.8 | 5' arm 3' arm | |||
4090 | + | 6292 | 90 | 21.5 | -22 | NP_056931 | 5' arm 3' arm | ||
4087 | + | 3573 | 83 | 23.5 | -22.7 | NP_056931 | 5' arm 3' arm | ||
4093 | + | 8470 | 88 | 26 | -23.4 | NP_056931 | 5' arm 3' arm | ||
4086 | + | 2506 | 90 | 23 | -24.3 | NP_056931 | 5' arm 3' arm | ||
4083 | + | 1160 | 90 | 22 | -24.7 | NP_056931 | 5' arm 3' arm | ||
4084 | + | 1389 | 88 | 19 | -24.7 | NP_056931 | 5' arm 3' arm | ||
4092 | + | 8031 | 89 | 25.5 | -24.8 | NP_056931 | 5' arm 3' arm | ||
4088 | + | 5128 | 90 | 24.5 | -27 | NP_056931 | 5' arm 3' arm | ||
4089 | + | 5588 | 87 | 21.5 | -27.1 | NP_056931 | 5' arm 3' arm | ||
4091 | + | 7566 | 85 | 24 | -29.6 | NP_056931 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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