miRNA display CGI


Results 1 - 15 of 15 are showing below:
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GenBank Identifier RefSeq Acc. Name
9628101 NC_001655.1 Hepatitis GB virus B

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
4095 - 6870 90 20 -19.7 NP_056931 5' arm      3' arm
4096 - 8711 90 19 -20.3 NP_056931 5' arm      3' arm
4082 + 125 84 21.5 -21.3 5' arm      3' arm
4085 + 2031 84 19 -21.3 NP_056931 5' arm      3' arm
4094 - 301 89 21 -21.8 5' arm      3' arm
4090 + 6292 90 21.5 -22 NP_056931 5' arm      3' arm
4087 + 3573 83 23.5 -22.7 NP_056931 5' arm      3' arm
4093 + 8470 88 26 -23.4 NP_056931 5' arm      3' arm
4086 + 2506 90 23 -24.3 NP_056931 5' arm      3' arm
4083 + 1160 90 22 -24.7 NP_056931 5' arm      3' arm
4084 + 1389 88 19 -24.7 NP_056931 5' arm      3' arm
4092 + 8031 89 25.5 -24.8 NP_056931 5' arm      3' arm
4088 + 5128 90 24.5 -27 NP_056931 5' arm      3' arm
4089 + 5588 87 21.5 -27.1 NP_056931 5' arm      3' arm
4091 + 7566 85 24 -29.6 NP_056931 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.