miRNA display CGI


Results 1 - 20 of 129 are showing below:
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GenBank Identifier RefSeq Acc. Name
57753420 NC_006635.1 Cotesia congregata virus segment Circle3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
31420 - 6758 89 30.5 -36.4 5' arm      3' arm
31413 + 6559 90 23 -35.2 YP_184775 5' arm      3' arm
31415 + 26664 88 28.5 -34 5' arm      3' arm
31473 - 4615 90 20 -33.3 5' arm      3' arm
31480 + 20573 90 23 -33.3 5' arm      3' arm
31483 - 18870 90 21.5 -33.3 5' arm      3' arm
31442 + 5156 89 34.5 -33.1 5' arm      3' arm
31465 - 31542 89 34.5 -33.1 5' arm      3' arm
31453 - 1054 90 31 -32.8 5' arm      3' arm
31511 - 15431 82 21 -32.7 5' arm      3' arm
31491 + 3923 90 23.5 -32.5 5' arm      3' arm
31411 + 6028 89 29 -32.5 5' arm      3' arm
31457 + 5368 79 26.5 -32.5 5' arm      3' arm
31477 + 4066 89 24 -32.5 5' arm      3' arm
31528 - 6157 89 24 -32.5 5' arm      3' arm
31481 - 4155 90 26.5 -32.4 5' arm      3' arm
31524 + 6068 90 26.5 -32.4 5' arm      3' arm
31419 - 6650 90 24.5 -32.3 YP_184775 5' arm      3' arm
31422 - 26897 89 24.5 -31.9 5' arm      3' arm
31450 + 965 90 30.5 -31.5 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.