miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9629902 NC_001867.1 Walleye dermal sarcoma virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
6700 + 4062 90 21 -23.6 NP_045937 5' arm      3' arm
6701 + 4520 83 19 -23.24 NP_045937 5' arm      3' arm
6702 - 4603 85 24 -23.6 NP_045937 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.