miRNA display CGI


Results 1 - 17 of 17 are showing below:
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GenBank Identifier RefSeq Acc. Name
9630317 NC_001890.1 Enterobacteriophage Qbeta

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
7086 + 302 86 19.5 -19.9 NP_046749 5' arm      3' arm
7087 + 1745 90 20.5 -30.2 NP_046750 5' arm      3' arm
7088 + 1913 90 23.5 -20.6 NP_046750 5' arm      3' arm
7089 + 2578 90 21 -21.2 NP_046752 5' arm      3' arm
7090 + 2997 89 23 -28.7 NP_046752 5' arm      3' arm
7091 + 3205 87 20.5 -27 NP_046752 5' arm      3' arm
7092 + 3581 88 19.5 -20 NP_046752 5' arm      3' arm
7093 + 3836 89 20 -30.4 NP_046752 5' arm      3' arm
7094 - 163 90 19.5 -22.2 NP_046749 5' arm      3' arm
7095 - 482 89 21 -28.2 NP_046749 5' arm      3' arm
7096 - 940 88 22 -29.1 NP_046749 5' arm      3' arm
7097 - 1183 90 21.5 -19.6 NP_046749 5' arm      3' arm
7098 - 1834 90 19 -35.3 NP_046750 5' arm      3' arm
7099 - 2270 85 19 -28.1 NP_046750 5' arm      3' arm
7100 - 3472 81 21 -23.1 NP_046752 5' arm      3' arm
7101 - 3764 90 22 -26.4 NP_046752 5' arm      3' arm
7102 - 4039 86 23.5 -29.6 NP_046752 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.