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GenBank Identifier | RefSeq Acc. | Name |
9630317 | NC_001890.1 | Enterobacteriophage Qbeta |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
7086 | + | 302 | 86 | 19.5 | -19.9 | NP_046749 | 5' arm 3' arm | ||
7087 | + | 1745 | 90 | 20.5 | -30.2 | NP_046750 | 5' arm 3' arm | ||
7088 | + | 1913 | 90 | 23.5 | -20.6 | NP_046750 | 5' arm 3' arm | ||
7089 | + | 2578 | 90 | 21 | -21.2 | NP_046752 | 5' arm 3' arm | ||
7090 | + | 2997 | 89 | 23 | -28.7 | NP_046752 | 5' arm 3' arm | ||
7091 | + | 3205 | 87 | 20.5 | -27 | NP_046752 | 5' arm 3' arm | ||
7092 | + | 3581 | 88 | 19.5 | -20 | NP_046752 | 5' arm 3' arm | ||
7093 | + | 3836 | 89 | 20 | -30.4 | NP_046752 | 5' arm 3' arm | ||
7094 | - | 163 | 90 | 19.5 | -22.2 | NP_046749 | 5' arm 3' arm | ||
7095 | - | 482 | 89 | 21 | -28.2 | NP_046749 | 5' arm 3' arm | ||
7096 | - | 940 | 88 | 22 | -29.1 | NP_046749 | 5' arm 3' arm | ||
7097 | - | 1183 | 90 | 21.5 | -19.6 | NP_046749 | 5' arm 3' arm | ||
7098 | - | 1834 | 90 | 19 | -35.3 | NP_046750 | 5' arm 3' arm | ||
7099 | - | 2270 | 85 | 19 | -28.1 | NP_046750 | 5' arm 3' arm | ||
7100 | - | 3472 | 81 | 21 | -23.1 | NP_046752 | 5' arm 3' arm | ||
7101 | - | 3764 | 90 | 22 | -26.4 | NP_046752 | 5' arm 3' arm | ||
7102 | - | 4039 | 86 | 23.5 | -29.6 | NP_046752 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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