miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
50253389 NC_006022.1 Bluetongue virus segment 7

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
28645 + 1034 89 24 -29.9 5' arm      3' arm
28641 + 706 89 20.5 -21.3 5' arm      3' arm
28640 + 512 88 20 -21.2 YP_052952 5' arm      3' arm
28646 + 2902 86 19 -19.8 YP_052968 5' arm      3' arm
28644 + 370 90 19 -19.4 YP_052967 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.