miRNA display CGI


Results 1 - 10 of 10 are showing below:
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GenBank Identifier RefSeq Acc. Name
38349471 NC_002618.2 Cocksfoot mottle virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
9847 - 4067 85 20 -19.6 5' arm      3' arm
9843 - 1968 88 21.5 -23.7 NP_941376 5' arm      3' arm
9840 + 3527 76 21.5 -30.7 NP_941377 5' arm      3' arm
9839 + 3156 90 21 -25.7 NP_941377 5' arm      3' arm
9845 - 2962 86 19 -20.8 NP_941957 5' arm      3' arm
9841 - 607 90 19.5 -22.9 NP_941957 5' arm      3' arm
9846 - 3207 89 21 -26.6 NP_941957 5' arm      3' arm
9844 - 2067 90 23 -21.7 NP_941957 5' arm      3' arm
9838 + 2876 88 19 -19.8 NP_941957 5' arm      3' arm
9842 - 1013 87 19 -21.4 NP_941957 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.