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GenBank Identifier | RefSeq Acc. | Name |
20522134 | NC_003808.1 | Spinach latent virus RNA 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
15224 | + | 664 | 89 | 21 | -22.1 | NP_620677 | 5' arm 3' arm | ||
15225 | + | 3181 | 90 | 20 | -25.1 | NP_620677 | 5' arm 3' arm | ||
15226 | + | 2293 | 87 | 19 | -21.3 | NP_620678 | 5' arm 3' arm | ||
15227 | - | 2379 | 87 | 22 | -25.7 | NP_620679 | 5' arm 3' arm | ||
15228 | + | 1880 | 86 | 21 | -25.2 | NP_620681 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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