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GenBank Identifier | RefSeq Acc. | Name |
21218488 | NC_003900.1 | Aura virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
15383 | + | 894 | 89 | 19.5 | -21.3 | NP_632023 | 5' arm 3' arm | ||
15384 | - | 463 | 89 | 19.5 | -23.3 | NP_632023 | 5' arm 3' arm | ||
15385 | - | 3447 | 86 | 20 | -23.7 | NP_632023 | 5' arm 3' arm | ||
15386 | - | 9088 | 81 | 23.5 | -20.5 | NP_632024 | 5' arm 3' arm | ||
15387 | - | 9368 | 85 | 20.5 | -21.2 | NP_632024 | 5' arm 3' arm | ||
15388 | - | 9489 | 90 | 21.5 | -23.1 | NP_632024 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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