miRNA display CGI


Results 1 - 14 of 14 are showing below:
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GenBank Identifier RefSeq Acc. Name
9628654 NC_001702.1 Murine type C retrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
4239 + 3469 83 21 -22.2 5' arm      3' arm
4243 - 1201 89 21 -25.3 NP_043518 5' arm      3' arm
4244 - 1607 86 22.5 -19.6 NP_043518 5' arm      3' arm
4250 - 6450 90 19.5 -21.5 NP_043519 5' arm      3' arm
4247 - 4326 88 20 -22.6 5' arm      3' arm
4246 - 4183 90 21 -22.2 5' arm      3' arm
4248 - 5591 89 22 -21.1 5' arm      3' arm
4249 - 5783 90 24 -20 5' arm      3' arm
4251 - 6682 87 24.5 -20.1 NP_043519 5' arm      3' arm
4242 + 6263 90 19 -27.2 NP_043519 5' arm      3' arm
4241 + 6105 90 21 -24 NP_043519 5' arm      3' arm
4240 + 5838 89 22.5 -26.9 NP_043519 5' arm      3' arm
4238 + 93 90 19 -23.6 5' arm      3' arm
4245 - 2395 86 19 -26.6 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.