miRNA display CGI


Results 1 - 20 of 434 are showing below:
Show page:


GenBank Identifier RefSeq Acc. Name
51518014 NC_006146.1 Cercopithecine herpesvirus 15

<< Previous Page | Next Page >>
ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
28870 + 134290 89 25 -29.1 rlcv-mir-rL1-9       3' arm
28868 + 134008 89 25.5 -27.4 rlcv-mir-rL1-8 5' arm      
28867 + 133857 88 21 -24.7 rlcv-mir-rL1-7 5' arm      
28866 + 133683 81 26 -23.3 rlcv-mir-rL1-6 5' arm      3' arm
28865 + 133546 87 25 -25 rlcv-mir-rL1-5 5' arm      3' arm
28864 + 133280 79 19.5 -23.8 rlcv-mir-rL1-4       3' arm
28863 + 133104 90 28.5 -32.2 rlcv-mir-rL1-3       3' arm
28762 + 36661 81 26 -23.1 rlcv-mir-rL1-2       3' arm
28891 + 143266 84 24.5 -27.4 rlcv-mir-rL1-15       3' arm
28889 + 142826 86 24 -25.2 rlcv-mir-rL1-14 5' arm      3' arm
28885 + 141820 84 27 -34.4 rlcv-mir-rL1-13       3' arm
28884 + 141542 89 28.5 -27.9 rlcv-mir-rL1-12 5' arm      3' arm
28881 + 141098 84 23 -23.2 rlcv-mir-rL1-10       3' arm
28761 + 35308 87 26.5 -29.6 rlcv-mir-rL1-1 5' arm      
28890 + 143018 86 24 -25.2 #rlcv-mir-rL1-14 5' arm      3' arm
28735 + 7964 86 21 -21 5' arm      3' arm
28737 + 8294 90 19.5 -20.2 5' arm      3' arm
28738 + 9290 89 23 -32.2 5' arm      3' arm
28734 + 7603 90 24 -26.8 5' arm      3' arm
28726 + 2253 87 19 -21.11 YP_067940 5' arm      3' arm
<< Previous Page | Next Page >>

* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

Download Candidate Sequences

Back To miRNA display CGI home



TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.