miRNA display CGI


Results 1 - 20 of 31 are showing below:
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GenBank Identifier RefSeq Acc. Name
9627742 NC_001623.1 Autographa californica nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
3518 - 30318 89 19 -27.1 NP_054066 5' arm      3' arm
3512 + 108540 87 20 -24.2 NP_054158 5' arm      3' arm
3513 + 115008 87 20 -25.4 NP_054164 5' arm      3' arm
3514 + 120255 89 23.5 -20.6 NP_054168 5' arm      3' arm
3515 + 122329 89 21.5 -20.4 NP_054169 5' arm      3' arm
3516 + 122740 89 20 -22.9 NP_054170 5' arm      3' arm
3517 + 131996 88 20.5 -30.6 NP_054182 5' arm      3' arm
3530 - 112043 82 20.5 -20.2 NP_054162 5' arm      3' arm
3529 - 110085 87 24 -27.3 NP_054159 5' arm      3' arm
3510 + 101300 85 19.5 -22.3 NP_054149 5' arm      3' arm
3511 + 101544 89 21 -19.6 NP_054149 5' arm      3' arm
3509 + 95577 89 19 -21.6 NP_054139 5' arm      3' arm
3501 + 5822 90 24 -21.3 NP_054038 5' arm      3' arm
3502 + 16411 80 22 -24.6 NP_054050 5' arm      3' arm
3503 + 17645 80 20.5 -21.2 NP_054051 5' arm      3' arm
3504 + 25716 90 27 -19.6 5' arm      3' arm
3505 + 66686 90 25.5 -20.9 NP_054110 5' arm      3' arm
3507 + 88272 90 23 -23.5 NP_054132 5' arm      3' arm
3506 + 87735 90 19.5 -23.9 NP_054131 5' arm      3' arm
3508 + 93426 89 22.5 -20.7 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.