miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
105	+	17413	90	21	-27	AP_000149		5' arm      3' arm
106	+	20716	89	19.5	-25.1			5' arm      3' arm
107	+	21341	87	22.5	-23.1			5' arm      3' arm
108	+	22054	88	21	-22.7			5' arm      3' arm
109	+	22591	89	20	-34.1			5' arm      3' arm
110	+	22944	88	19	-31			5' arm      3' arm
111	+	23390	90	21	-22.2			5' arm      3' arm
112	+	24453	87	24	-34.1			5' arm      3' arm
113	+	25039	84	19.5	-29.8			5' arm      3' arm
114	+	29510	88	20	-24	AP_000153		5' arm      3' arm
115	+	31054	81	20	-21.4	AP_000157		5' arm      3' arm
116	-	1302	87	23.5	-22.1			5' arm      3' arm
117	-	3118	89	20	-22.7			5' arm      3' arm
118	-	3355	87	19	-29.2			5' arm      3' arm
119	-	4875	90	19.5	-23.2			5' arm      3' arm
120	-	7927	90	20	-21	AP_000143		5' arm      3' arm
121	-	10382	87	20	-23.3			5' arm      3' arm
122	-	10740	90	26.5	-32.6	AP_000145		5' arm      3' arm
123	-	10866	88	21	-25	AP_000145		5' arm      3' arm
124	-	11009	90	21	-22	AP_000145		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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